Downloading raw files from HTGU



Importing into CLC



Trimming



99% of reads were retained.

De novo assembly performed on trimmed reads (default settings) (218 million reads)




Consensus_s_2_3_49625.fa.zip

Blasting on Inquiry





....start job 5/27 7am
5/31: Done

Harding_blastall_out.txt.zip


RNA-seq
running RNA-seq on denovo (49625)
5/31: 9:30 am


RNA-seq on Omykiss Sigenae version 8





Reference Assembly on Omykiss v8